PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26799
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 170aa    MW: 19265.5 Da    PI: 8.7513
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26799genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.76.6e-5191491128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
               +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++            +  ++e+yfFs +d+ky++g+r+nrat++g+Wkatg+dk+
  EMT26799   9 VPPGFRFHPTEEELVGYYLARKVSSHKIDL-DIIQEVDLYRIEPWDLQErcgkygggggGQEDPTTEYYFFSYKDRKYPSGTRTNRATAAGFWKATGRDKP 108
               69****************************.99**************954676665543222234499********************************* PP

       NAM  92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
               vls+      +++g++ktLvfy+grap+g+ktdW++heyrl
  EMT26799 109 VLSSssssPASVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 149
               ***854444445***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-518156IPR003441NAC domain
PROSITE profilePS5100550.8169170IPR003441NAC domain
PfamPF023652.9E-2610149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MEESSCNTVP PGFRFHPTEE ELVGYYLARK VSSHKIDLDI IQEVDLYRIE PWDLQERCGK  60
YGGGGGGQED PTTEYYFFSY KDRKYPSGTR TNRATAAGFW KATGRDKPVL SSSSSSPASV  120
IGMRKTLVFY RGRAPNGRKT DWIIHEYRLQ SNEHAPTQAC KSPSMHAWTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-46314910140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015650248.15e-89PREDICTED: NAC domain-containing protein 105
SwissprotQ9C8W94e-71NAC30_ARATH; NAC domain-containing protein 30
SwissprotO655086e-71NAC76_ARATH; NAC domain-containing protein 76
TrEMBLM8BXW01e-127M8BXW0_AEGTA; NAC domain-containing protein 7
STRINGMLOC_19933.11e-102(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25943791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.13e-71NAC domain containing protein 76